STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114796543Translationally-controlled tumor protein homolog. (170 aa)    
Predicted Functional Partners:
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.984
eef1b2
Eukaryotic translation elongation factor 1 beta 2.
  
 
 0.968
rplp0
Ribosomal protein lateral stalk subunit P0.
   
 
 0.932
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
   0.932
rpl9
Ribosomal protein L9.
   
 
 0.931
rps2
Ribosomal protein S2.
   
 
 0.924
rps8
Ribosomal protein S8.
   
 
 0.924
ENSDCDP00000032355
Ribosomal protein S15.
   
   0.914
rps16
Ribosomal protein S16.
   
 
 0.914
rpl31
Ribosomal protein L31.
   
 
 0.914
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.