STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114800079Ankyrin repeat and SOCS box protein 6-like. (442 aa)    
Predicted Functional Partners:
cul5
Cullin 5.
    
 0.902
cdc27
Cell division cycle 27.
   
  0.882
cdc23
Cell division cycle 23.
   
  0.876
anapc10
Anaphase promoting complex subunit 10.
    
  0.869
cdc16
Cell division cycle 16.
    
  0.868
anapc2
Anaphase promoting complex subunit 2.
    
  0.866
LOC114796208
Polycomb group RING finger protein 5-A.
    
  0.865
anapc7
Anaphase promoting complex subunit 7.
    
  0.857
cbx8
Chromobox 8.
    
  0.854
LOC114798800
E3 ubiquitin-protein ligase NRDP1.
   
 0.851
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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