STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114769520Periostin-like. (819 aa)    
Predicted Functional Partners:
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
    
 
 0.921
ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
    
 
 0.740
mre11
MRE11 homolog, double strand break repair nuclease.
    
 0.725
lum
Lumican.
   
  
 0.675
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
    
   0.664
LOC114772861
6-pyruvoyl tetrahydrobiopterin synthase-like.
    
  0.644
LOC114796017
6-pyruvoyl tetrahydrobiopterin synthase-like.
    
  0.644
LOC114789644
Fibronectin-like.
   
 
 0.601
alpl
Alkaline phosphatase, biomineralization associated.
     
 0.588
LOC114802209
Intestinal-type alkaline phosphatase 1-like.
     
 0.588
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.