STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114786740Synaptic vesicle glycoprotein 2C-like. (739 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.870
LOC114787879
Laminin subunit gamma-1-like.
    
 0.850
LOC114798206
Laminin subunit beta-2-like.
     
 0.840
ENSDCDP00000028649
annotation not available
     
 0.839
LOC114766766
Laminin subunit beta-4-like.
    
  0.829
LOC114769340
Cytosolic phospholipase A2-like.
    
 0.821
LOC114768816
Cytosolic phospholipase A2-like.
    
 0.821
LOC114801841
Cytosolic phospholipase A2-like.
    
 0.821
lamc1
Laminin subunit gamma 1.
    
 0.789
LOC114785987
Laminin subunit gamma-3-like.
    
 0.789
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.