STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114800669Eukaryotic translation initiation factor 4B-like. (647 aa)    
Predicted Functional Partners:
rps6
Ribosomal protein S6.
   
 0.960
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.929
LOC114797060
Eukaryotic initiation factor 4A-I.
   
 0.924
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.900
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.895
LOC114787509
Eukaryotic initiation factor 4A-II-like.
   
 0.878
EIF4A2
Eukaryotic translation initiation factor 4A2.
   
 0.878
LOC114778102
Eukaryotic translation initiation factor 3 subunit C.
   
 0.874
eif3a
Eukaryotic translation initiation factor 3 subunit A.
   
 0.865
LOC114792138
Eukaryotic translation initiation factor 4E-1B-like.
   
 0.853
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.