STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114767132Apoptosis-enhancing nuclease-like. (321 aa)    
Predicted Functional Partners:
pan3
poly(A) specific ribonuclease subunit PAN3.
    
 0.952
pcna
Proliferating cell nuclear antigen.
  
 0.915
wdr18
WD repeat domain 18.
  
  0.822
rexo2
RNA exonuclease 2.
  
 0.807
fbh1
F-box DNA helicase 1.
  
 
 0.791
LOC114793842
Suppressor of SWI4 1 homolog.
   
 
 0.772
LOC114802711
Deoxynucleotidyltransferase terminal-interacting protein 2-like.
   
    0.767
rnaseh2b
Ribonuclease H2 subunit B.
     
 0.750
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.750
gmps
Guanine monophosphate synthase.
  
 
 0.744
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.