STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88ACoiled-coil domain containing 88A. (1878 aa)    
Predicted Functional Partners:
LOC114786319
Guanine nucleotide-binding protein G(o) subunit alpha-like.
    
 
 0.471
LOC114798791
Guanine nucleotide-binding protein G(k) subunit alpha.
    
 
 0.471
ENSDCDP00000019199
annotation not available
    
 
 0.471
LOC114766699
Guanine nucleotide-binding protein G(i) subunit alpha-1-like.
    
 
 0.471
LOC114801062
Guanine nucleotide-binding protein G(i) subunit alpha-2.
    
 
 0.471
LOC114765109
Guanine nucleotide-binding protein G(i) subunit alpha-1.
    
 
 0.471
LOC114800371
Guanine nucleotide-binding protein G(i) subunit alpha-2-like.
    
 
 0.471
ENSDCDP00000034842
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
    
 
 0.471
gnao1
G protein subunit alpha o1.
    
 
 0.471
LOC114798792
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 
 0.428
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.