STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000044860Gremlin 1b. (164 aa)    
Predicted Functional Partners:
LOC114790699
Growth/differentiation factor 6-A-like.
    
 0.985
gdf6
Growth differentiation factor 6.
    
 0.978
LOC114787755
Bone morphogenetic protein 2-like.
    
  0.877
LOC114770037
Bone morphogenetic protein 8A-like.
    
  0.877
LOC114763654
Rho GTPase-activating protein 11A-like.
  
  
 
0.873
ENSDCDP00000002160
annotation not available
    
 0.862
LOC114796679
Growth/differentiation factor 6-A-like.
    
 0.862
ENSDCDP00000024570
Gremlin 1a, DAN family BMP antagonist.
  
  
 
0.860
ENSDCDP00000011805
annotation not available
    
  0.846
LOC114769385
Uncharacterized LOC114769385.
    
  0.846
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.