STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000045692annotation not available (117 aa)    
Predicted Functional Partners:
ENSDCDP00000008539
annotation not available
    
  0.655
ENSDCDP00000019732
annotation not available
   
 0.569
cd79a
CD79a molecule.
   
 0.565
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.545
LOC114800127
Rano class II histocompatibility antigen, A beta chain-like.
   
  0.535
LOC114800130
H-2 class II histocompatibility antigen, I-E beta chain-like.
   
  0.535
ENSDCDP00000063629
annotation not available
    
  0.532
ENSDCDP00000025772
annotation not available
  
 
  0.529
ubc
Ubiquitin C.
    
  0.521
ENSDCDP00000011687
annotation not available
  
 
  0.520
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.