Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDCDP00000048451 | LOC114788705 | ENSDCDP00000048451 | ENSDCDP00000005411 | Growth arrest-specific 1b. | Tiggy-winkle hedgehog protein-like. | 0.910 |
ENSDCDP00000048451 | LOC114796438 | ENSDCDP00000048451 | ENSDCDP00000007334 | Growth arrest-specific 1b. | Indian hedgehog B protein-like. | 0.908 |
ENSDCDP00000048451 | LOC114799284 | ENSDCDP00000048451 | ENSDCDP00000010150 | Growth arrest-specific 1b. | Growth arrest-specific protein 1-like. | 0.872 |
ENSDCDP00000048451 | boc | ENSDCDP00000048451 | ENSDCDP00000054368 | Growth arrest-specific 1b. | BOC cell adhesion associated, oncogene regulated. | 0.922 |
ENSDCDP00000048451 | cdon | ENSDCDP00000048451 | ENSDCDP00000054206 | Growth arrest-specific 1b. | Cell adhesion associated, oncogene regulated. | 0.902 |
ENSDCDP00000048451 | dhh | ENSDCDP00000048451 | ENSDCDP00000053915 | Growth arrest-specific 1b. | Desert hedgehog signaling molecule. | 0.905 |
ENSDCDP00000048451 | lrp2 | ENSDCDP00000048451 | ENSDCDP00000025057 | Growth arrest-specific 1b. | LDL receptor related protein 2. | 0.871 |
ENSDCDP00000048451 | ptch1 | ENSDCDP00000048451 | ENSDCDP00000008885 | Growth arrest-specific 1b. | Patched 1. | 0.902 |
ENSDCDP00000048451 | ptch2 | ENSDCDP00000048451 | ENSDCDP00000042415 | Growth arrest-specific 1b. | Patched 2. | 0.902 |
ENSDCDP00000048451 | shh | ENSDCDP00000048451 | ENSDCDP00000012742 | Growth arrest-specific 1b. | Sonic hedgehog signaling molecule. | 0.914 |
LOC114788705 | ENSDCDP00000048451 | ENSDCDP00000005411 | ENSDCDP00000048451 | Tiggy-winkle hedgehog protein-like. | Growth arrest-specific 1b. | 0.910 |
LOC114788705 | LOC114796438 | ENSDCDP00000005411 | ENSDCDP00000007334 | Tiggy-winkle hedgehog protein-like. | Indian hedgehog B protein-like. | 0.697 |
LOC114788705 | LOC114799284 | ENSDCDP00000005411 | ENSDCDP00000010150 | Tiggy-winkle hedgehog protein-like. | Growth arrest-specific protein 1-like. | 0.901 |
LOC114788705 | boc | ENSDCDP00000005411 | ENSDCDP00000054368 | Tiggy-winkle hedgehog protein-like. | BOC cell adhesion associated, oncogene regulated. | 0.968 |
LOC114788705 | cdon | ENSDCDP00000005411 | ENSDCDP00000054206 | Tiggy-winkle hedgehog protein-like. | Cell adhesion associated, oncogene regulated. | 0.965 |
LOC114788705 | dhh | ENSDCDP00000005411 | ENSDCDP00000053915 | Tiggy-winkle hedgehog protein-like. | Desert hedgehog signaling molecule. | 0.805 |
LOC114788705 | lrp2 | ENSDCDP00000005411 | ENSDCDP00000025057 | Tiggy-winkle hedgehog protein-like. | LDL receptor related protein 2. | 0.887 |
LOC114788705 | ptch1 | ENSDCDP00000005411 | ENSDCDP00000008885 | Tiggy-winkle hedgehog protein-like. | Patched 1. | 0.979 |
LOC114788705 | ptch2 | ENSDCDP00000005411 | ENSDCDP00000042415 | Tiggy-winkle hedgehog protein-like. | Patched 2. | 0.982 |
LOC114796438 | ENSDCDP00000048451 | ENSDCDP00000007334 | ENSDCDP00000048451 | Indian hedgehog B protein-like. | Growth arrest-specific 1b. | 0.908 |
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