STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kank4KN motif and ankyrin repeat domains 4. (771 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.739
LOC114767364
Kinesin-like protein KIF21A.
    
 
 0.624
KIF21A
Kinesin-like protein KIF21A.
    
 
 0.624
birc6
Baculoviral IAP repeat containing 6.
   
 0.610
mars1
methionyl-tRNA synthetase 1.
   
 0.597
traf7
TNF receptor associated factor 7.
    
  0.552
LOC114769340
Cytosolic phospholipase A2-like.
    
 0.545
LOC114768816
Cytosolic phospholipase A2-like.
    
 0.545
LOC114801841
Cytosolic phospholipase A2-like.
    
 0.545
katnal2
Katanin catalytic subunit A1 like 2.
   
 0.540
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.