STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a4Solute carrier family 38 member 4. (542 aa)    
Predicted Functional Partners:
trpm2
Transient receptor potential cation channel subfamily M member 2.
     
 0.776
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.762
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.758
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.753
LOC114768086
Ras-related GTP-binding protein A.
   
 0.739
LAMTOR4
Ragulator complex protein LAMTOR4.
    
 0.666
ENSDCDP00000038617
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.666
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.641
RIMS2-2
Regulating synaptic membrane exocytosis protein 2-like.
   
 
 0.641
LOC114766027
V-type proton ATPase subunit d 1.
    
 0.628
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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