STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn5Protein tyrosine phosphatase non-receptor type 5. (528 aa)    
Predicted Functional Partners:
ptprr
Protein tyrosine phosphatase receptor type R.
     
0.923
mapk12
Mitogen-activated protein kinase 12.
    
 0.916
LOC114794667
Mitogen-activated protein kinase 1-like.
    
 0.916
mapk1
Mitogen-activated protein kinase 1.
    
 0.916
LOC114798887
Mitogen-activated protein kinase 13-like.
    
 0.916
LOC114764886
Mitogen-activated protein kinase 11-like.
    
 0.916
LOC114793383
Dual specificity protein phosphatase 3-like.
   
 0.882
LOC114795422
Dual specificity protein phosphatase 3-like.
   
 0.882
mapk7
Mitogen-activated protein kinase 7.
    
 0.873
LOC114798153
Mitogen-activated protein kinase 14A-like.
    
 0.873
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.