STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sptbn4Spectrin beta, non-erythrocytic 4. (2759 aa)    
Predicted Functional Partners:
sptan1
Spectrin alpha, non-erythrocytic 1.
   
0.976
LOC114773127
Spectrin beta chain, non-erythrocytic 1-like.
  
  
 
0.860
LOC114785587
Spectrin beta chain, non-erythrocytic 1.
  
  
 
0.860
SPTBN1
Spectrin beta chain, non-erythrocytic 1-like.
  
  
 
0.860
LOC114793065
Spectrin beta chain, non-erythrocytic 1-like.
  
  
 
0.860
LOC114772453
Ankyrin-1-like.
   
 0.713
LOC114787682
Ankyrin-2-like.
   
 0.713
LOC114769901
Ankyrin-3-like.
   
 0.713
ank1
Ankyrin 1.
   
 0.713
LOC114795444
Ankyrin-3-like.
   
 0.713
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.