STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyroxd1Pyridine nucleotide-disulphide oxidoreductase domain 1. (500 aa)    
Predicted Functional Partners:
LOC114789687
Cytochrome b5 reductase 4.
    
 0.922
suox
Sulfite oxidase.
   
 0.851
LOC114768622
Cis-aconitate decarboxylase-like.
  
 0.842
pipox
Pipecolic acid and sarcosine oxidase.
  
 0.842
dao
D-amino acid oxidase.
  
 0.842
acod1
Aconitate decarboxylase 1.
  
 0.842
LOC114801381
D-aspartate oxidase-like.
  
 0.842
LOC114792342
Core histone macro-H2A.1.
  
 0.836
LOC114795208
Core histone macro-H2A.2.
  
 0.836
LOC114787130
Cholesterol 7-desaturase-like.
  
 
 0.815
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.