STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114798366Serine/threonine-protein kinase PINK1, mitochondrial-like. (541 aa)    
Predicted Functional Partners:
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
 0.992
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.956
mfn2
Mitofusin 2.
   
 0.950
ENSDCDP00000038449
annotation not available
    
 0.946
ubc
Ubiquitin C.
    
 0.942
LOC114799318
Ubiquitin-like.
    
 0.937
LOC114793543
Mitochondrial Rho GTPase 1-A.
    
 0.923
rhot2
Ras homolog family member T2.
    
 0.923
rhot1
Ras homolog family member T1.
    
 0.915
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.912
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.