STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000053403annotation not available (163 aa)    
Predicted Functional Partners:
LOC114790171
CD209 antigen-like protein A.
    
0.812
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.593
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.593
LOC114798449
Tyrosine-protein phosphatase non-receptor type 11-like.
   
 0.593
tyrobp
TYRO protein tyrosine kinase binding protein.
    
 0.591
scara3
Scavenger receptor class A member 3.
    
  0.569
LOC114788010
High affinity immunoglobulin epsilon receptor subunit gamma-like.
   
 0.546
LOC114788445
High affinity immunoglobulin epsilon receptor subunit gamma-like.
   
 0.546
LOC114774181
H-2 class I histocompatibility antigen, Q9 alpha chain-like.
    
  0.535
ENSDCDP00000018206
annotation not available
    
  0.535
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.