STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114783589Vitronectin-like. (427 aa)    
Predicted Functional Partners:
LOC114796891
Plasminogen activator inhibitor 1-like.
   
 0.979
LOC114774162
Plasminogen activator inhibitor 1-like.
   
 0.979
ENSDCDP00000022140
Lymphocyte antigen 6 family member M5.
    
 0.935
ENSDCDP00000022143
annotation not available
    
 0.935
LOC114789938
Uncharacterized LOC114789938.
    
 0.935
ENSDCDP00000028518
annotation not available
    
 0.935
itgb5
Integrin subunit beta 5.
    
 0.908
itgb4
Integrin subunit beta 4.
    
 0.908
serpinc1
Serpin family C member 1.
   
 0.904
itgb6
Integrin subunit beta 6.
    
 0.902
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.