STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000055785annotation not available (111 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.970
frem1
FRAS1 related extracellular matrix 1.
    
 0.731
fras1
Fraser extracellular matrix complex subunit 1.
    
 0.701
gle1
GLE1 RNA export mediator.
    
 0.668
ENSDCDP00000032355
Ribosomal protein S15.
   
  0.654
LOC114796491
E3 SUMO-protein ligase RanBP2-like.
   
 
  0.652
rps11
Ribosomal protein S11.
   
 0.641
rps19
Ribosomal protein S19.
   
 0.639
rps21
Ribosomal protein S21.
   
  0.631
LOC114765799
40S ribosomal protein S13.
   
 0.626
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.