STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000056700annotation not available (131 aa)    
Predicted Functional Partners:
ENSDCDP00000027163
annotation not available
  
 
  0.645
ENSDCDP00000027170
annotation not available
  
 
  0.643
ENSDCDP00000051726
annotation not available
  
 
  0.632
LOC114795270
Collagen alpha-1(XIII) chain-like.
  
 
  0.629
ENSDCDP00000027168
annotation not available
  
 
  0.622
LOC114796745
Acetylcholinesterase collagenic tail peptide-like.
  
 
  0.618
COL25A1
Collagen type XXV alpha 1 chain.
  
 
  0.598
LOC114800008
Mannose-binding protein C-like.
  
     0.541
LOC114766018
Collagen and calcium-binding EGF domain-containing protein 1-like.
  
     0.408
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.