STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114770030Palmitoyltransferase ZDHHC18-like. (464 aa)    
Predicted Functional Partners:
wrn
WRN RecQ like helicase.
    
 0.684
LOC114786161
Golgin subfamily A member 7B-like.
    
 0.670
LOC114783873
Golgin subfamily A member 7B-like.
    
 0.670
golga7
Golgin A7.
    
 0.670
ENSDCDP00000034828
Protection of telomeres 1 homolog.
    
 0.629
ENSDCDP00000054967
annotation not available
    
 0.618
coq3
Coenzyme Q3, methyltransferase.
     
 0.557
rad50
RAD50 double strand break repair protein.
    
 0.553
nbn
Nibrin.
    
  0.537
mre11
MRE11 homolog, double strand break repair nuclease.
    
  0.527
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.