STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114765717Liprin-beta-2-like. (947 aa)    
Predicted Functional Partners:
ppfia3
PTPRF interacting protein alpha 3.
   
0.808
ppfia4
PTPRF interacting protein alpha 4.
   
0.808
ppfia2
PTPRF interacting protein alpha 2.
   
0.808
ppfia1
PTPRF interacting protein alpha 1.
   
0.808
ENSDCDP00000027477
Kazrin, periplakin interacting protein b.
   
0.704
LOC114798189
kazrin-A-like.
   
0.704
LOC114788656
Receptor-type tyrosine-protein phosphatase delta-like.
     
 0.432
LOC114788609
Receptor-type tyrosine-protein phosphatase S-like.
     
 0.432
LOC114788325
Receptor-type tyrosine-protein phosphatase F-like.
     
 0.432
ptprf
Protein tyrosine phosphatase receptor type F.
     
 0.432
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.