STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114799161Hamartin-like. (1125 aa)    
Predicted Functional Partners:
stip1
Stress induced phosphoprotein 1.
  
 0.997
tsc2
TSC complex subunit 2.
   
 0.994
ppp5c
Protein phosphatase 5 catalytic subunit.
    
 0.988
LOC114781165
TBC1 domain family member 7-like.
    
 0.982
LOC114781115
TBC1 domain family member 7-like.
    
 0.982
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.975
rheb
Ras homolog, mTORC1 binding.
   
 0.969
LOC114800766
GTP-binding protein Rheb-like.
   
 0.969
LOC114798250
Prostaglandin E synthase 3-like.
   
 0.968
LOC114797952
Prostaglandin E synthase 3-like.
   
 0.968
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.