STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc142Coiled-coil domain containing 142. (930 aa)    
Predicted Functional Partners:
LOC114784733
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.858
ppp2r3c
Protein phosphatase 2 regulatory subunit B''gamma.
     
 0.807
LOC114787509
Eukaryotic initiation factor 4A-II-like.
   
 0.743
LOC114797060
Eukaryotic initiation factor 4A-I.
   
 0.743
LOC114793024
Eukaryotic initiation factor 4A-I-like.
   
 0.743
EIF4A2
Eukaryotic translation initiation factor 4A2.
   
 0.743
LOC114791828
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
 0.698
LOC114785946
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
    
 0.698
LOC114799879
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like.
    
 0.698
LOC114767883
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like.
    
 0.642
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.