STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stbd1Starch binding domain 1. (488 aa)    
Predicted Functional Partners:
epm2a
EPM2A glucan phosphatase, laforin.
    
 
 0.843
gbe1
1,4-alpha-glucan branching enzyme 1.
    
 
 0.737
LOC114792597
1,4-alpha-glucan-branching enzyme-like.
    
 
 0.737
ENSDCDP00000001551
Glycogenin 2.
   
 
 0.709
gyg1
Glycogenin 1.
   
 
 0.709
LOC114766697
Glycogenin-1-like.
   
 
 0.709
LOC114782929
Glycogen [starch] synthase, muscle-like.
    
 
 0.688
gys2
Glycogen synthase 2.
    
 
 0.688
LOC114784304
Glycogen debranching enzyme-like.
    
 
 0.626
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
    
 
 0.626
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.