STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_08285U3 small nucleolar RNA-associated protein 15-like protein. (318 aa)    
Predicted Functional Partners:
B4U80_05010
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
B4U80_02322
Transducin beta-like protein 3.
  
 0.999
B4U80_01489
WD-repeat protein-like protein.
   
 0.999
B4U80_03492
Nop domain-containing protein.
   
 0.999
B4U80_05443
WD repeat-containing protein 46-like protein.
   
 0.999
B4U80_01479
WD repeat-containing protein 43-like protein.
   
 0.999
B4U80_07527
Dip2/Utp12 domain and WD-repeat protein-like protein.
  
 0.999
B4U80_08287
Nucleolar complex protein 4-like protein.
   
 0.999
B4U80_11519
U3 small nucleolar RNA-associated protein 6-like protein.
   
 0.999
B4U80_06825
WD repeat-containing protein 3-like protein.
  
0.999
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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