STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_12123Peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like protein. (239 aa)    
Predicted Functional Partners:
B4U80_09076
Spermine synthase-like isoform X1.
     
 0.891
B4U80_04553
Spermidine synthase-like protein; Belongs to the spermidine/spermine synthase family.
     
 0.823
B4U80_03894
Spermidine synthase-like protein; Belongs to the spermidine/spermine synthase family.
     
 0.823
B4U80_11595
SUMO-conjugating enzyme UBC9-B-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.662
B4U80_06581
NADH-ubiquinone oxidoreductase subunit 8-like protein.
     
 0.625
B4U80_03279
Non-specific lipid-transfer protein-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.579
B4U80_00188
Ubiquitin-conjugating enzyme E2 D1-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.575
B4U80_07396
Ubiquitin-conjugating enzyme: active site-containing protein-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.575
B4U80_08342
Serine protease HTRA2-like isoform X1.
     
 0.488
B4U80_01723
Ubiquitin-conjugating enzyme E2-24 kDa-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.461
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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