Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_04812CD109 antigen-like protein. (483 aa)    
Predicted Functional Partners:
B4U80_07082
Polycomb protein Scm-like isoform X2.
    
 0.736
B4U80_01771
Chromobox protein 7-like isoform X7.
    
  0.729
B4U80_03554
E3 ubiquitin-protein ligase RING2-like protein.
    
 0.709
B4U80_01954
Thioester-containing protein 2:-like isoform J.
 
     0.673
B4U80_01725
RING-type domain-containing protein.
    
 0.602
B4U80_10435
Polycomb complex protein BMI-1-like protein.
    
 0.602
B4U80_04125
Thioester-containing protein-like protein.
 
     0.566
B4U80_00035
Thioester-containing protein-like protein.
 
     0.548
B4U80_03316
Thioester-containing protein-like protein.
 
     0.532
B4U80_10889
CD109 antigen-like protein.
 
     0.516
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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