Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B4U80_00439 | B4U80_02150 | A0A443SRN2 | A0A443SRI4 | Nuclear receptor corepressor 1-like protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.736 |
B4U80_00439 | B4U80_03096 | A0A443SRN2 | A0A443STJ4 | Nuclear receptor corepressor 1-like protein. | Taiman-D-like protein. | 0.734 |
B4U80_00439 | B4U80_03099 | A0A443SRN2 | A0A443STL9 | Nuclear receptor corepressor 1-like protein. | Nuclear receptor coactivator 2-like protein. | 0.734 |
B4U80_00439 | B4U80_03451 | A0A443SRN2 | A0A443S928 | Nuclear receptor corepressor 1-like protein. | Vitamin D3 receptor B-like protein. | 0.908 |
B4U80_00439 | B4U80_03981 | A0A443SRN2 | A0A443SIL6 | Nuclear receptor corepressor 1-like protein. | Retinoic acid receptor RXR-alpha-B-like protein. | 0.994 |
B4U80_00439 | B4U80_04309 | A0A443SRN2 | A0A443STJ8 | Nuclear receptor corepressor 1-like protein. | F-box-like/WD repeat-containing protein TBL1XR1 isoform X2. | 0.994 |
B4U80_00439 | B4U80_07767 | A0A443SRN2 | A0A443SVU6 | Nuclear receptor corepressor 1-like protein. | Nuclear hormone receptor E75-like protein. | 0.965 |
B4U80_02150 | B4U80_00439 | A0A443SRI4 | A0A443SRN2 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1-like protein. | 0.736 |
B4U80_02150 | B4U80_03096 | A0A443SRI4 | A0A443STJ4 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Taiman-D-like protein. | 0.786 |
B4U80_02150 | B4U80_03099 | A0A443SRI4 | A0A443STL9 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor coactivator 2-like protein. | 0.786 |
B4U80_02150 | B4U80_03451 | A0A443SRI4 | A0A443S928 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Vitamin D3 receptor B-like protein. | 0.859 |
B4U80_02150 | B4U80_03981 | A0A443SRI4 | A0A443SIL6 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoic acid receptor RXR-alpha-B-like protein. | 0.967 |
B4U80_02150 | B4U80_04309 | A0A443SRI4 | A0A443STJ8 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | F-box-like/WD repeat-containing protein TBL1XR1 isoform X2. | 0.758 |
B4U80_02150 | B4U80_07767 | A0A443SRI4 | A0A443SVU6 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear hormone receptor E75-like protein. | 0.925 |
B4U80_03096 | B4U80_00439 | A0A443STJ4 | A0A443SRN2 | Taiman-D-like protein. | Nuclear receptor corepressor 1-like protein. | 0.734 |
B4U80_03096 | B4U80_02150 | A0A443STJ4 | A0A443SRI4 | Taiman-D-like protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.786 |
B4U80_03096 | B4U80_03451 | A0A443STJ4 | A0A443S928 | Taiman-D-like protein. | Vitamin D3 receptor B-like protein. | 0.905 |
B4U80_03096 | B4U80_03981 | A0A443STJ4 | A0A443SIL6 | Taiman-D-like protein. | Retinoic acid receptor RXR-alpha-B-like protein. | 0.989 |
B4U80_03096 | B4U80_04309 | A0A443STJ4 | A0A443STJ8 | Taiman-D-like protein. | F-box-like/WD repeat-containing protein TBL1XR1 isoform X2. | 0.628 |
B4U80_03096 | B4U80_07767 | A0A443STJ4 | A0A443SVU6 | Taiman-D-like protein. | Nuclear hormone receptor E75-like protein. | 0.932 |
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