STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_07735E3 ubiquitin-protein ligase HUWE1-like protein. (160 aa)    
Predicted Functional Partners:
B4U80_02803
Ubiquitin protein ligase-like protein.
 
 
 0.924
B4U80_07614
E3 ubiquitin-protein ligase Su(Dx)-like protein.
 
 
 0.924
B4U80_07256
E3 ubiquitin-protein ligase HUWE1-like protein.
 
     0.923
B4U80_09463
E3 ubiquitin-protein ligase SMURF2-like protein.
 
  
 0.922
B4U80_08799
E3 ubiquitin-protein ligase HUWE1-like protein.
 
     0.912
B4U80_04515
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.812
B4U80_07872
E3 ubiquitin-protein ligase TRIP12-like isoform X1.
   
 
0.803
B4U80_07122
Ribosomal_S27 domain-containing protein.
   
 0.766
B4U80_06771
Ubiquitin-like domain-containing protein.
    
 0.753
B4U80_06812
Ubiquitin/60s ribosomal protein L40-like protein.
    
 0.753
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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