STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_1298139S ribosomal protein L38-like protein. (614 aa)    
Predicted Functional Partners:
B4U80_06996
39S ribosomal protein L19-like protein.
   
 
 0.982
B4U80_03556
60S ribosomal protein L3-like protein.
   
   0.975
B4U80_05956
Mitochondrial ribosomal protein L4-like protein.
   
 
 0.974
B4U80_04541
39S ribosomal protein L18-like protein.
   
 
 0.968
B4U80_07166
28S ribosomal protein S30-like isoform X1.
   
 
 0.965
B4U80_05157
Putative ribosomal protein L13-like protein.
  
 
 0.964
B4U80_07763
39S ribosomal protein L9-like protein.
   
 
 0.964
B4U80_11495
Peptidyl-tRNA hydrolase-like protein.
   
   0.963
B4U80_02907
28S ribosomal protein S18a-like protein.
   
 
 0.962
B4U80_05824
39S ribosomal protein L15-like protein.
   
 
 0.962
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.