STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_10475PR domain zinc finger protein 10-like protein. (928 aa)    
Predicted Functional Partners:
B4U80_12006
Muscle M-line assembly protein unc-89-like protein.
    
 0.762
B4U80_08248
Lysine-specific demethylase 6A-like isoform X1.
    
 0.569
B4U80_00892
Cytochrome b5 reductase 4-like isoform X2; Belongs to the cytochrome b5 family.
    
  0.552
B4U80_04210
Tonsoku-like protein.
    
  0.509
B4U80_10200
Putative ATP-dependent RNA helicase YTHDC2-like protein.
    
  0.505
B4U80_09048
Chromodomain-helicase-DNA-binding protein Mi-2-like isoform X5.
    
 0.494
B4U80_06785
Suppressor of fused-like protein.
    
 0.493
B4U80_07727
General transcription factor 3C polypeptide 3-like protein.
    
 0.480
B4U80_04668
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.453
B4U80_07201
Ragulator complex protein LAMTOR2-like isoform X1.
    
  0.450
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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