STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_06393Low-density lipoprotein receptor-like protein. (866 aa)    
Predicted Functional Partners:
B4U80_10140
Phosphatidylinositide phosphatase SAC1-like protein.
    
 0.573
B4U80_13745
PID domain-containing protein.
    
 0.560
B4U80_13227
RGS domain-containing protein.
    
 0.555
B4U80_04500
Axin-1-like protein.
    
 0.555
B4U80_02343
Hepatocyte growth factor receptor-like protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.543
B4U80_02919
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.539
B4U80_13855
Alpha-2-MRAP_N domain-containing protein.
    
 0.537
B4U80_10827
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 0.531
B4U80_06661
Peptidase S1 domain-containing protein.
  
 
0.499
B4U80_11393
WSCD family member-like protein.
    
 0.492
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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