STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_0023140S ribosomal protein S27; Belongs to the eukaryotic ribosomal protein eS27 family. (685 aa)    
Predicted Functional Partners:
B4U80_04239
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
     
 0.919
B4U80_06061
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.908
B4U80_07340
Cytosolic non-specific dipeptidase-like protein.
   
 
 0.854
B4U80_07339
Cytosolic non-specific dipeptidase-like isoform X1.
   
 
 0.854
B4U80_00892
Cytochrome b5 reductase 4-like isoform X2; Belongs to the cytochrome b5 family.
   
 
 0.848
B4U80_00819
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.841
B4U80_04607
Bifunctional glutamate/proline--tRNA ligase-like protein.
    
 0.841
B4U80_10158
Regulating synaptic membrane exocytosis protein 2-like protein.
     
 0.727
B4U80_02853
Dopamine beta-hydroxylase-like protein.
     
 0.697
B4U80_05569
4-aminobutyrate aminotransferase-like protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.668
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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