STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_09627THO complex subunit 4-like protein. (236 aa)    
Predicted Functional Partners:
B4U80_02508
Spliceosome RNA helicase WM6-like protein.
   
 0.999
B4U80_00045
THO complex subunit 2-like isoform X1.
   
 0.998
B4U80_00977
Nuclear RNA export factor 1-like protein.
    
 0.997
B4U80_02482
Regulator of nonsense transcripts 3A-like protein.
    
 0.995
B4U80_09278
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
   
 0.992
B4U80_08208
Regulator of nonsense transcripts 1-like protein.
   
 
 0.988
B4U80_10253
THO complex subunit 1-like protein.
    
 0.988
B4U80_03111
THO complex subunit 3-like protein.
   
 0.985
B4U80_11551
Protein mago nashi-like protein.
   
 0.978
B4U80_02256
Uncharacterized protein.
   
 0.973
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.