STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4U80_01651TPR_REGION domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (679 aa)    
Predicted Functional Partners:
B4U80_06626
40S ribosomal protein S2-like protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.906
B4U80_00469
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.902
B4U80_05416
rRNA 2'-O-methyltransferase fibrillarin-like isoform X1.
   
 
 0.826
B4U80_10596
Histone-lysine N-methyltransferase SETD1-like protein.
    
 0.737
B4U80_07907
Cell adhesion complex protein bystin-like protein.
   
 0.725
B4U80_08456
Uncharacterized protein.
   
 0.724
B4U80_08717
H/ACA ribonucleoprotein complex subunit 2-like protein.
   
 0.723
B4U80_02787
RRP12-like protein.
   
   0.703
B4U80_10170
Guanine nucleotide-binding protein-like 3.
   
   0.702
B4U80_04515
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.699
Your Current Organism:
Leptotrombidium deliense
NCBI taxonomy Id: 299467
Other names: L. deliense, scrub typhus mite
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