STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900068845_00247Unannotated protein. (167 aa)    
Predicted Functional Partners:
valS
Unannotated protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
     
 0.643
GCA_900068845_00245
Unannotated protein.
       0.620
GCA_900068845_02151
Unannotated protein.
 
   
 0.475
kefG
Unannotated protein; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.
 
   
 0.449
yceA
Unannotated protein; Belongs to the UPF0176 family.
 
     0.425
GCA_900068845_01044
Unannotated protein.
   
   0.417
GCA_900068845_00173
Unannotated protein.
     
 0.416
ycfP
Unannotated protein; Belongs to the UPF0227 family.
  
     0.415
thrA
Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family.
     
 0.406
metL
Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family.
     
 0.406
Your Current Organism:
Enterobacter ludwigii
NCBI taxonomy Id: 299767
Other names: CCUG 51323, CCUG 51354, CIP 108491, DSM 16688, E. ludwigii, Enterobacter ludwigii Hoffmann et al. 2005, Enterobacter sp. GN02226, Enterobacter sp. GN02730, Pantoea sp. RCE-5, bacterium K9, strain EN-119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.