STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900068845_01479Unannotated protein. (872 aa)    
Predicted Functional Partners:
GCA_900068845_01477
Unannotated protein.
 
   
 0.887
ynbE
Unannotated protein.
 
   
 0.886
GCA_900068845_00932
Unannotated protein.
 
   
 0.795
GCA_900068845_03800
Unannotated protein.
 
     0.784
GCA_900068845_03926
Unannotated protein.
 
     0.782
GCA_900068845_02140
Unannotated protein.
 
   
 0.781
GCA_900068845_00818
Unannotated protein.
 
   
 0.778
GCA_900068845_03771
Unannotated protein.
  
   
 0.765
GCA_900068845_03978
Unannotated protein.
  
     0.765
GCA_900068845_04407
Unannotated protein.
 
   
 0.765
Your Current Organism:
Enterobacter ludwigii
NCBI taxonomy Id: 299767
Other names: CCUG 51323, CCUG 51354, CIP 108491, DSM 16688, E. ludwigii, Enterobacter ludwigii Hoffmann et al. 2005, Enterobacter sp. GN02226, Enterobacter sp. GN02730, Pantoea sp. RCE-5, bacterium K9, strain EN-119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.