STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900068845_01482Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_900068845_02523
Unannotated protein.
 
 
 0.602
GCA_900068845_01897
Unannotated protein.
    
   0.584
ydbK
Unannotated protein.
       0.566
GCA_900068845_01481
Unannotated protein.
       0.563
GCA_900068845_03181
Unannotated protein.
  
 
 0.529
pma1
Unannotated protein.
  
 
 0.529
ftsH
Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.515
atpB
Unannotated protein; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.451
GCA_900068845_01050
Unannotated protein.
   
 
 0.408
hflC
Unannotated protein; HflC and HflK could regulate a protease.
   
 
 0.408
Your Current Organism:
Enterobacter ludwigii
NCBI taxonomy Id: 299767
Other names: CCUG 51323, CCUG 51354, CIP 108491, DSM 16688, E. ludwigii, Enterobacter ludwigii Hoffmann et al. 2005, Enterobacter sp. GN02226, Enterobacter sp. GN02730, Pantoea sp. RCE-5, bacterium K9, strain EN-119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.