STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppFUnannotated protein; Belongs to the ABC transporter superfamily. (334 aa)    
Predicted Functional Partners:
oppC
Unannotated protein.
  
 0.994
oppD
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 
0.984
oppB
Unannotated protein.
 
 0.963
GCA_900068845_01365
Unannotated protein.
  
 0.943
GCA_900068845_04390
Unannotated protein.
  
 0.930
GCA_900068845_04383
Unannotated protein.
  
 0.926
oppA
Unannotated protein.
  
 0.913
GCA_900068845_04250
Unannotated protein.
  
 0.913
GCA_900068845_02526
Unannotated protein.
  
 0.899
dppC
Unannotated protein.
  
 0.891
Your Current Organism:
Enterobacter ludwigii
NCBI taxonomy Id: 299767
Other names: CCUG 51323, CCUG 51354, CIP 108491, DSM 16688, E. ludwigii, Enterobacter ludwigii Hoffmann et al. 2005, Enterobacter sp. GN02226, Enterobacter sp. GN02730, Pantoea sp. RCE-5, bacterium K9, strain EN-119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.