Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_900068845_02336 | metB | GCA_900068845_02336 | GCA_900068845_04564 | Unannotated protein. | Unannotated protein. | 0.525 |
GCA_900068845_03069 | metB | GCA_900068845_03069 | GCA_900068845_04564 | Unannotated protein. | Unannotated protein. | 0.695 |
GCA_900068845_03069 | metL | GCA_900068845_03069 | GCA_900068845_04563 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.400 |
GCA_900068845_03393 | metB | GCA_900068845_03393 | GCA_900068845_04564 | Unannotated protein. | Unannotated protein. | 0.581 |
GCA_900068845_03393 | metL | GCA_900068845_03393 | GCA_900068845_04563 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.400 |
cysK | metB | GCA_900068845_02353 | GCA_900068845_04564 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.646 |
cysK | metL | GCA_900068845_02353 | GCA_900068845_04563 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.400 |
cysM | metB | GCA_900068845_02359 | GCA_900068845_04564 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.641 |
cysM | metL | GCA_900068845_02359 | GCA_900068845_04563 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.400 |
metB | GCA_900068845_02336 | GCA_900068845_04564 | GCA_900068845_02336 | Unannotated protein. | Unannotated protein. | 0.525 |
metB | GCA_900068845_03069 | GCA_900068845_04564 | GCA_900068845_03069 | Unannotated protein. | Unannotated protein. | 0.695 |
metB | GCA_900068845_03393 | GCA_900068845_04564 | GCA_900068845_03393 | Unannotated protein. | Unannotated protein. | 0.581 |
metB | cysK | GCA_900068845_04564 | GCA_900068845_02353 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.646 |
metB | cysM | GCA_900068845_04564 | GCA_900068845_02359 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.641 |
metB | metF | GCA_900068845_04564 | GCA_900068845_04562 | Unannotated protein. | Unannotated protein; Belongs to the methylenetetrahydrofolate reductase family. | 0.658 |
metB | metJ | GCA_900068845_04564 | GCA_900068845_04565 | Unannotated protein. | Unannotated protein; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.576 |
metB | metL | GCA_900068845_04564 | GCA_900068845_04563 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.907 |
metB | purF | GCA_900068845_04564 | GCA_900068845_02186 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.587 |
metB | yccU | GCA_900068845_04564 | GCA_900068845_03803 | Unannotated protein. | Unannotated protein. | 0.901 |
metF | metB | GCA_900068845_04562 | GCA_900068845_04564 | Unannotated protein; Belongs to the methylenetetrahydrofolate reductase family. | Unannotated protein. | 0.658 |
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