STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBV15_00757Protein MICAL-3. (3585 aa)    
Predicted Functional Partners:
DBV15_07813
Uncharacterized protein.
   
 
 0.707
DBV15_08687
Ras-related protein Rab-10.
   
 
 0.707
DBV15_02288
Uncharacterized protein.
    
 0.661
DBV15_02645
Plexin-A4.
    
 
 0.629
DBV15_02644
Plexin-A4.
    
 
 0.511
DBV15_04480
Plexin-B.
    
 
 0.511
DBV15_02509
MKLP1_Arf_bdg domain-containing protein.
    
 
 0.469
DBV15_07885
Uncharacterized protein.
   
   0.453
DBV15_02947
Uncharacterized protein.
   
   0.453
DBV15_00210
Ras-related protein Rab-28.
   
   0.453
Your Current Organism:
Temnothorax longispinosus
NCBI taxonomy Id: 300112
Other names: Leptothorax longispinosus, T. longispinosus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.