STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBV15_05467Putative methyltransferase WBSCR22. (275 aa)    
Predicted Functional Partners:
DBV15_10854
tRNA methyltransferase-like protein.
   
 0.964
DBV15_08210
Pre-rRNA-processing protein TSR1-like protein.
   
 0.962
DBV15_07470
Bystin 1.
   
 0.953
DBV15_02037
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
  0.936
DBV15_00490
Uncharacterized protein.
    
 0.934
DBV15_04403
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.934
DBV15_03600
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.934
DBV15_03517
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.934
DBV15_04023
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.934
DBV15_09988
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
  0.933
Your Current Organism:
Temnothorax longispinosus
NCBI taxonomy Id: 300112
Other names: Leptothorax longispinosus, T. longispinosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.