DBV15_03501 protein (Temnothorax longispinosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DBV15_03501

Death domain-containing adapter protein BG4. (291 aa)

Predicted Functional Partners:

DBV15_11512

0.969

DBV15_02696

0.845

DBV15_03429

0.744

DBV15_04129

0.735

DBV15_04170

0.732

DBV15_04171

0.732

DBV15_09388

0.711

DBV15_03576

0.698

DBV15_06633

0.675

DBV15_03593

0.670

Your Current Organism:

Temnothorax longispinosus

NCBI taxonomy Id: 300112
Other names: Leptothorax longispinosus, T. longispinosus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DBV15_02696	DBV15_03429	A0A4V3S9P4	A0A4S2KE22	Leucine-rich repeat serine/threonine-protein kinase 1.	Uncharacterized protein.	0.999
DBV15_02696	DBV15_03501	A0A4V3S9P4	A0A4S2KU74	Leucine-rich repeat serine/threonine-protein kinase 1.	Death domain-containing adapter protein BG4.	0.845
DBV15_02696	DBV15_03576	A0A4V3S9P4	A0A4S2KV44	Leucine-rich repeat serine/threonine-protein kinase 1.	RING-type domain-containing protein.	0.907
DBV15_02696	DBV15_03593	A0A4V3S9P4	A0A4S2KL64	Leucine-rich repeat serine/threonine-protein kinase 1.	Uncharacterized protein.	0.999
DBV15_02696	DBV15_04129	A0A4V3S9P4	A0A4S2KWB0	Leucine-rich repeat serine/threonine-protein kinase 1.	Uncharacterized protein.	0.707
DBV15_02696	DBV15_04170	A0A4V3S9P4	A0A4S2KDV8	Leucine-rich repeat serine/threonine-protein kinase 1.	Myosin-XVIIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.998
DBV15_02696	DBV15_04171	A0A4V3S9P4	A0A4S2KHJ8	Leucine-rich repeat serine/threonine-protein kinase 1.	Myosin-XVIIIa.	0.998
DBV15_02696	DBV15_06633	A0A4V3S9P4	A0A4S2JYN9	Leucine-rich repeat serine/threonine-protein kinase 1.	Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.	0.990
DBV15_02696	DBV15_09388	A0A4V3S9P4	A0A4S2KY48	Leucine-rich repeat serine/threonine-protein kinase 1.	Leucine-rich repeat and guanylate kinase domain-containing protein.	0.999
DBV15_02696	DBV15_11512	A0A4V3S9P4	A0A4S2L5U4	Leucine-rich repeat serine/threonine-protein kinase 1.	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	0.942
DBV15_03429	DBV15_02696	A0A4S2KE22	A0A4V3S9P4	Uncharacterized protein.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.999
DBV15_03429	DBV15_03501	A0A4S2KE22	A0A4S2KU74	Uncharacterized protein.	Death domain-containing adapter protein BG4.	0.744
DBV15_03429	DBV15_03593	A0A4S2KE22	A0A4S2KL64	Uncharacterized protein.	Uncharacterized protein.	0.550
DBV15_03429	DBV15_04129	A0A4S2KE22	A0A4S2KWB0	Uncharacterized protein.	Uncharacterized protein.	0.732
DBV15_03429	DBV15_06633	A0A4S2KE22	A0A4S2JYN9	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.	0.550
DBV15_03429	DBV15_09388	A0A4S2KE22	A0A4S2KY48	Uncharacterized protein.	Leucine-rich repeat and guanylate kinase domain-containing protein.	0.635
DBV15_03501	DBV15_02696	A0A4S2KU74	A0A4V3S9P4	Death domain-containing adapter protein BG4.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.845
DBV15_03501	DBV15_03429	A0A4S2KU74	A0A4S2KE22	Death domain-containing adapter protein BG4.	Uncharacterized protein.	0.744
DBV15_03501	DBV15_03576	A0A4S2KU74	A0A4S2KV44	Death domain-containing adapter protein BG4.	RING-type domain-containing protein.	0.698
DBV15_03501	DBV15_03593	A0A4S2KU74	A0A4S2KL64	Death domain-containing adapter protein BG4.	Uncharacterized protein.	0.670