STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBV15_07369TNFR-Cys domain-containing protein. (318 aa)    
Predicted Functional Partners:
DBV15_04614
HAUS augmin-like complex subunit 3.
    
 0.621
DBV15_06422
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.620
DBV15_05424
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.614
DBV15_04535
Guanine nucleotide-binding protein subunit gamma.
    
  0.610
DBV15_04163
Muscle M-line assembly protein unc-89.
    
 0.597
DBV15_10943
Inactive tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.576
DBV15_07877
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
  0.570
DBV15_07525
WD_REPEATS_REGION domain-containing protein.
    
  0.570
DBV15_05871
BZIP domain-containing protein.
    
  0.565
DBV15_03242
RRM domain-containing protein.
    
  0.564
Your Current Organism:
Temnothorax longispinosus
NCBI taxonomy Id: 300112
Other names: Leptothorax longispinosus, T. longispinosus
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