STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBV15_06674Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (653 aa)    
Predicted Functional Partners:
DBV15_06179
Lipid phosphate phosphohydrolase 3.
    
   0.538
DBV15_12291
Phosphatidate phosphatase PPAPDC1A.
    
   0.538
DBV15_04840
L-type lectin-like domain-containing protein.
   
 
 0.479
MED16
Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
   0.459
DBV15_02936
Sorting nexin-8.
    
   0.428
DBV15_05239
Rhomboid domain-containing protein.
    
 
 0.428
DBV15_02680
GOLD domain-containing protein.
   
  
 0.412
Your Current Organism:
Temnothorax longispinosus
NCBI taxonomy Id: 300112
Other names: Leptothorax longispinosus, T. longispinosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.