Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0M4EIK6 | Dbus_chr2Lg731 | A0A0M4EIK6 | A0A0M4E4A3 | Nlp. | Nop5. | 0.782 |
A0A0M4EIK6 | Dbus_chr3Lg689 | A0A0M4EIK6 | A0A0M3QW48 | Nlp. | CG18178. | 0.931 |
Dbus_chr2Lg427 | Dbus_chr2Lg731 | A0A0M4EE72 | A0A0M4E4A3 | eIF-4a; Belongs to the DEAD box helicase family. | Nop5. | 0.567 |
Dbus_chr2Lg427 | Dbus_chr3Lg404 | A0A0M4EE72 | A0A0M4EHN5 | eIF-4a; Belongs to the DEAD box helicase family. | Maker651; Belongs to the eukaryotic initiation factor 4E family. | 0.965 |
Dbus_chr2Lg427 | Dbus_chr3Lg600 | A0A0M4EE72 | A0A0M4ED33 | eIF-4a; Belongs to the DEAD box helicase family. | eIF4E-3; Belongs to the eukaryotic initiation factor 4E family. | 0.965 |
Dbus_chr2Lg427 | Dbus_chr3Lg640 | A0A0M4EE72 | A0A0M5J818 | eIF-4a; Belongs to the DEAD box helicase family. | eIF-4E; Belongs to the eukaryotic initiation factor 4E family. | 0.971 |
Dbus_chr2Lg427 | Dbus_chr3Lg689 | A0A0M4EE72 | A0A0M3QW48 | eIF-4a; Belongs to the DEAD box helicase family. | CG18178. | 0.867 |
Dbus_chr2Lg427 | Dbus_chr3Rg762 | A0A0M4EE72 | A0A0M4F376 | eIF-4a; Belongs to the DEAD box helicase family. | Atx2. | 0.407 |
Dbus_chr2Lg427 | PAN2 | A0A0M4EE72 | A0A0M4EVE5 | eIF-4a; Belongs to the DEAD box helicase family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.702 |
Dbus_chr2Lg427 | PAN3 | A0A0M4EE72 | A0A0M4EXP0 | eIF-4a; Belongs to the DEAD box helicase family. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.602 |
Dbus_chr2Lg427 | eIF3a | A0A0M4EE72 | A0A0M4EN49 | eIF-4a; Belongs to the DEAD box helicase family. | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.954 |
Dbus_chr2Lg731 | A0A0M4EIK6 | A0A0M4E4A3 | A0A0M4EIK6 | Nop5. | Nlp. | 0.782 |
Dbus_chr2Lg731 | Dbus_chr2Lg427 | A0A0M4E4A3 | A0A0M4EE72 | Nop5. | eIF-4a; Belongs to the DEAD box helicase family. | 0.567 |
Dbus_chr2Lg731 | Dbus_chr3Lg689 | A0A0M4E4A3 | A0A0M3QW48 | Nop5. | CG18178. | 0.810 |
Dbus_chr2Lg731 | eIF3a | A0A0M4E4A3 | A0A0M4EN49 | Nop5. | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.806 |
Dbus_chr3Lg404 | Dbus_chr2Lg427 | A0A0M4EHN5 | A0A0M4EE72 | Maker651; Belongs to the eukaryotic initiation factor 4E family. | eIF-4a; Belongs to the DEAD box helicase family. | 0.965 |
Dbus_chr3Lg404 | Dbus_chr3Lg689 | A0A0M4EHN5 | A0A0M3QW48 | Maker651; Belongs to the eukaryotic initiation factor 4E family. | CG18178. | 0.803 |
Dbus_chr3Lg404 | PAN2 | A0A0M4EHN5 | A0A0M4EVE5 | Maker651; Belongs to the eukaryotic initiation factor 4E family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.523 |
Dbus_chr3Lg404 | PAN3 | A0A0M4EHN5 | A0A0M4EXP0 | Maker651; Belongs to the eukaryotic initiation factor 4E family. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.570 |
Dbus_chr3Lg404 | eIF3a | A0A0M4EHN5 | A0A0M4EN49 | Maker651; Belongs to the eukaryotic initiation factor 4E family. | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.446 |
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