STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbus_chr3Rg990CG8449. (667 aa)    
Predicted Functional Partners:
Dbus_chr2Lg662
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.964
A0A0M5IXZ8
Vps35.
   
 
 0.935
A0A0M3QWG4
Vps26.
   
 
 0.763
Dbus_chrXg1376
Vps26.
   
 
 0.763
Dbus_chr2Lg973
Rab6.
   
 
 0.701
Dbus_chrXg535
C12.2.
   
 
 0.682
Dbus_chr2Rg687
Protein king tubby; Belongs to the TUB family.
    
 
 0.575
A0A0M4EAR6
RabX5.
   
 
 0.571
Dbus_chr3Rg516
CG5745.
    
 
0.552
Dbus_chr3Rg920
Snx3.
    
 
 0.552
Your Current Organism:
Drosophila busckii
NCBI taxonomy Id: 30019
Other names: D. busckii
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