STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iroCPutative ABC transporter protein; Code: V; COG: COG1132. (1219 aa)    
Predicted Functional Partners:
iroB
Putative glycosyl transferase; Code: GC; COG: COG1819.
 
  
 0.976
iroE
Putative exported protein; Code: R; COG: COG2819.
 
  
 0.924
iroD
Putative ferric enterochelin esterase; Code: P; COG: COG2382.
 
  
 0.919
yhjD
Conserved hypothetical protein; Code: S; COG: COG1295; orf.
  
   
 0.654
entF
ATP-dependent serine activating enzyme; May be part of enterobactin synthase as component F; Code: Q; COG: COG1020.
 
  
 0.619
ybdZ
Conserved hypothetical protein; Code: S; COG: COG3251; orf.
  
     0.610
yedP
Conserved hypothetical protein; Code: R; COG: COG3769; orf.
      
 0.592
sppA
Protease IV; Signal peptide peptidase; Code: OU; COG: COG0616.
      
 0.586
SDY_0750
Putative DEOR-type transcriptional regulator; Code: S; COG: COG3226.
  
     0.506
entB
2,3-dihydro-2,3-dihydroxybenzoate synthetase; Isochroismatase; Code: Q; COG: COG1535.
 
  
 0.479
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.