STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chaBCation transport regulator; Code: R; COG: COG4572. (76 aa)    
Predicted Functional Partners:
chaC
Cation transport regulator; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
  
  
 0.886
chaA
Sodium-calcium/proton antiporter; Code: P; COG: COG0387.
     
 0.747
ilvH
Acetolactate synthase III small subunit; Valine sensitive; Code: E; COG: COG0440.
      
 0.682
ybiX
Putative enzyme; Code: S; COG: COG3128.
      
 0.650
cysU
Sulfate, thiosulfate transport system permease T protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      
 0.645
tyrA
Chorismate mutase-T; Prephenate dehydrogenase; Code: E; COG: COG0287.
      
 0.643
pspB
Phage shock protein.
      
 0.582
pspC
Activates phage shock-protein expression; Code: KT; COG: COG1983.
      
 0.502
insB-38
IS1 ORF2.
       0.417
Your Current Organism:
Shigella dysenteriae
NCBI taxonomy Id: 300267
Other names: S. dysenteriae Sd197, Shigella dysenteriae Sd197, Shigella dysenteriae str. Sd197, Shigella dysenteriae strain Sd197
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